Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lactate permease lctp family transporter | ISP_008903 | Q46839 | + | 9820774 - 9822465 | 59435.1 |
| hd domain-containing protein | ISP_008904 | Q0P565 | + | 9822475 - 9823026 | 20341.0 |
| rna polymerase sigma factor | ISP_008905 | Q52997 | - | 9823023 - 9824288 | 46269.6 |
| ycii family protein | ISP_008906 | Q52996 | - | 9824328 - 9824678 | 12489.0 |
| ycii family protein | ISP_008907 | Q52996 | - | 9824683 - 9825108 | 15413.2 |
| hypothetical protein | ISP_008908 | Not Available | + | 9825294 - 9825563 | 10760.0 |
| small ribosomal subunit rsm22 family protein | ISP_008909 | Q2TBP8 | + | 9825588 - 9826577 | 34785.3 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | ISP_008910 | Not Available | - | 9826574 - 9827410 | 30358.4 |
| hamp domain-containing histidine kinase | ISP_008911 | A0PWB3 | + | 9827476 - 9828813 | 47501.0 |
| duf2079 domain-containing protein | ISP_008912 | Not Available | + | 9828870 - 9830195 | 47573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.