Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein | ISP_008803 | A4WBM9 | - | 9724554 - 9725231 | 23806.3 |
| nitrate- and nitrite sensing domain-containing protein | ISP_008804 | Not Available | - | 9725244 - 9728027 | 100369.0 |
| abc transporter substrate-binding protein | ISP_008805 | Not Available | + | 9728214 - 9729179 | 33014.8 |
| hypothetical protein | ISP_008806 | Not Available | - | 9729184 - 9729795 | 21503.5 |
| dead/deah box helicase | ISP_008807 | O53873 | + | 9729885 - 9731531 | 60914.7 |
| hypothetical protein | ISP_008808 | Not Available | - | 9731538 - 9731717 | 6599.0 |
| duf4253 domain-containing protein | ISP_008809 | Not Available | + | 9731975 - 9732736 | 27624.9 |
| duf72 domain-containing protein | ISP_008810 | Q8XCI6 | + | 9733318 - 9734163 | 32068.3 |
| o-succinylbenzoate synthase | ISP_008811 | Q47Q21 | + | 9734228 - 9735157 | 32129.6 |
| pspc domain-containing protein | ISP_008812 | Not Available | + | 9735234 - 9735449 | 7563.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.