Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase hydrophobic membrane anchor subunit | ISP_000862 | Not Available | - | 894200 - 894613 | 15702.6 |
| succinate dehydrogenase, cytochrome b556 subunit | ISP_000863 | O53368 | - | 894615 - 895058 | 16280.1 |
| npcbm/new2 domain-containing protein | ISP_000864 | Q9FXT4 | + | 895454 - 897445 | 70782.2 |
| glycoside hydrolase family 97 protein | ISP_000865 | D7CFN7 | + | 897457 - 899313 | 65938.9 |
| bmp family abc transporter substrate-binding protein | ISP_000866 | O05252 | + | 899601 - 900743 | 38358.0 |
| abc transporter atp-binding protein | ISP_000867 | A2RKA7 | + | 900822 - 902393 | 55504.7 |
| abc transporter permease | ISP_000868 | O05254 | + | 902390 - 903481 | 37418.6 |
| abc transporter permease | ISP_000869 | O05255 | + | 903478 - 904743 | 44196.3 |
| cytidine deaminase | ISP_000870 | P9WPH2 | + | 904744 - 905133 | 13187.8 |
| thymidine phosphorylase | ISP_000871 | P9WFS0 | + | 905130 - 906407 | 43138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.