Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | ISP_008753 | O31826 | - | 9675696 - 9677354 | 60123.9 |
| hypothetical protein | ISP_008754 | Not Available | - | 9677422 - 9678234 | 27796.3 |
| sige family rna polymerase sigma factor | ISP_008755 | H8F2P4 | - | 9678231 - 9678761 | 19323.0 |
| ricin domain-containing protein | ISP_008756 | Q3MUH7 | - | 9678868 - 9681558 | 91310.9 |
| aaa family atpase | ISP_008757 | Q1XDU8 | + | 9681659 - 9683278 | 58071.8 |
| duf2997 domain-containing protein | ISP_008758 | Not Available | + | 9683287 - 9683490 | 7287.2 |
| radical sam protein | ISP_008759 | P0A9N9 | + | 9683478 - 9684053 | 20630.6 |
| hypothetical protein | ISP_008760 | Not Available | + | 9684050 - 9684493 | 15538.7 |
| hypothetical protein | ISP_008761 | Not Available | + | 9684490 - 9685692 | 41827.4 |
| esx secretion-associated protein espg | ISP_008762 | Not Available | + | 9685728 - 9686429 | 25882.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.