Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | ISP_008673 | L0TCG5 | + | 9596903 - 9597766 | 30384.3 |
| s-(hydroxymethyl)mycothiol dehydrogenase | ISP_008674 | P80094 | + | 9597988 - 9599085 | 38706.2 |
| gamma-glutamylcyclotransferase | ISP_008675 | Not Available | + | 9599151 - 9599705 | 19610.3 |
| fad-binding oxidoreductase | ISP_008676 | O96759 | - | 9599683 - 9601101 | 49679.6 |
| tetr/acrr family transcriptional regulator | ISP_008677 | Q7VEN0 | + | 9601400 - 9601963 | 20202.6 |
| glycerol-3-phosphate dehydrogenase/oxidase | ISP_008678 | P64183 | + | 9601960 - 9603501 | 53314.2 |
| helix-turn-helix transcriptional regulator | ISP_008679 | C0H3X9 | + | 9603694 - 9603963 | 9829.87 |
| duf6498-containing protein | ISP_008680 | Not Available | + | 9603960 - 9604508 | 20469.0 |
| atp-binding cassette domain-containing protein | ISP_008681 | C0SPB4 | + | 9604501 - 9605427 | 32876.3 |
| abc transporter permease | ISP_008682 | O07523 | + | 9605424 - 9606614 | 41690.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.