Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | ISP_008663 | P45744 | - | 9585793 - 9587010 | 42510.6 |
| integration host factor | ISP_008664 | Not Available | - | 9587095 - 9587406 | 10924.4 |
| long-chain fatty acid--coa ligase | ISP_008665 | Q00594 | + | 9587851 - 9589479 | 59071.2 |
| sugar abc transporter substrate-binding protein | ISP_008666 | O32156 | + | 9589579 - 9590868 | 45405.6 |
| sugar abc transporter permease | ISP_008667 | O51924 | + | 9590865 - 9591761 | 32977.7 |
| carbohydrate abc transporter permease | ISP_008668 | P94530 | + | 9591791 - 9592576 | 28737.4 |
| tigr03767 family metallophosphoesterase | ISP_008669 | Not Available | + | 9592818 - 9594545 | 61679.1 |
| paai family thioesterase | ISP_008670 | P9WIM2 | + | 9594602 - 9595003 | 14307.1 |
| peptidase c39 family protein | ISP_008671 | Not Available | + | 9595075 - 9596337 | 45550.3 |
| carboxymuconolactone decarboxylase family protein | ISP_008672 | P96684 | - | 9596376 - 9596825 | 16371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.