Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf family protein | ISP_008643 | Q5YMT5 | + | 9570306 - 9571058 | 25870.7 |
| allophanate hydrolase subunit 1 | ISP_008644 | P0AAV5 | + | 9571055 - 9571666 | 21288.4 |
| biotin-dependent carboxyltransferase family protein | ISP_008645 | P75745 | + | 9571663 - 9572496 | 28496.4 |
| hypothetical protein | ISP_008646 | Not Available | - | 9572530 - 9572769 | 8815.55 |
| hypothetical protein | ISP_008647 | Not Available | - | 9572762 - 9573115 | 12418.3 |
| helix-turn-helix domain-containing protein | ISP_008648 | Not Available | + | 9573199 - 9573780 | 21730.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ISP_008649 | P0CAT7 | - | 9573777 - 9574403 | 22524.8 |
| alcohol dehydrogenase catalytic domain-containing protein | ISP_008650 | A4YGN0 | - | 9574715 - 9575773 | 35983.3 |
| transcriptional regulator | ISP_008651 | Not Available | - | 9575803 - 9576135 | 12208.8 |
| llm class flavin-dependent oxidoreductase | ISP_008652 | Not Available | - | 9576208 - 9577026 | 28922.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.