Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2203 domain-containing protein | ISP_000842 | Not Available | - | 875909 - 876289 | 13669.4 |
| hypothetical protein | ISP_000843 | Not Available | - | 876315 - 876836 | 18160.2 |
| nadp-dependent isocitrate dehydrogenase | ISP_000844 | P65098 | + | 877094 - 878317 | 45460.0 |
| sh3 domain-containing protein | ISP_000845 | Not Available | + | 878499 - 878795 | 10174.3 |
| permease | ISP_000846 | Not Available | - | 878810 - 879358 | 18799.3 |
| tetr/acrr family transcriptional regulator | ISP_000847 | O53789 | - | 879438 - 880019 | 20495.3 |
| mbl fold metallo-hydrolase | ISP_000848 | P9WGC0 | - | 880523 - 881281 | 27064.2 |
| exodeoxyribonuclease iii | ISP_000849 | O26314 | + | 881376 - 882212 | 30816.9 |
| hypothetical protein | ISP_000850 | Not Available | + | 882529 - 882906 | 12740.8 |
| tryptophan--trna ligase | ISP_000851 | Q82HU1 | + | 882953 - 883984 | 38289.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.