Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | ISP_008543 | P0A4I1 | + | 9457736 - 9458413 | 24568.4 |
| hamp domain-containing histidine kinase | ISP_008544 | P0A4I7 | + | 9458406 - 9459521 | 40321.1 |
| d-ala-d-ala dipeptidase vanx | ISP_008545 | Q9XAK6 | - | 9459485 - 9460093 | 22860.8 |
| d-alanine--(r)-lactate ligase | ISP_008546 | Q9XAK7 | - | 9460090 - 9461118 | 35938.0 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | ISP_008547 | Q05709 | - | 9461111 - 9462064 | 34240.1 |
| pyridoxal-phosphate dependent enzyme | ISP_008548 | Q79FV4 | - | 9462241 - 9463230 | 34908.1 |
| helix-turn-helix transcriptional regulator | ISP_008549 | P96673 | - | 9463227 - 9463886 | 23762.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | ISP_008550 | P63503 | - | 9463899 - 9465098 | 43668.4 |
| non-ribosomal peptide synthetase | ISP_008551 | Q9HWG4 | + | 9465243 - 9469619 | 158811.0 |
| acyl carrier protein | ISP_008552 | Q7TXM0 | + | 9469616 - 9469879 | 9267.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.