Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | ISP_008523 | P32157 | - | 9438633 - 9439316 | 24667.2 |
| m20 family metallopeptidase | ISP_008524 | B2KZE7 | + | 9439372 - 9440745 | 48316.4 |
| nad(p)h-dependent oxidoreductase | ISP_008525 | Q9USJ6 | - | 9440756 - 9441733 | 35082.9 |
| rna polymerase sigma factor sigj | ISP_008526 | L0TCG5 | + | 9441834 - 9442850 | 36283.0 |
| sgnh/gdsl hydrolase family protein | ISP_008527 | Not Available | + | 9443019 - 9443816 | 29250.0 |
| tetr/acrr family transcriptional regulator | ISP_008528 | Q93PU7 | + | 9443795 - 9444382 | 20476.6 |
| duf2786 domain-containing protein | ISP_008529 | Q05292 | + | 9444400 - 9445119 | 26261.3 |
| long-chain-fatty-acid--coa ligase | ISP_008530 | Not Available | + | 9445173 - 9445910 | 26709.1 |
| winged helix-turn-helix domain-containing protein | ISP_008531 | Q57682 | + | 9445966 - 9446307 | 12262.8 |
| hypothetical protein | ISP_008532 | Not Available | + | 9446304 - 9446552 | 9516.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.