Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_008463 | Not Available | - | 9379655 - 9381004 | 47512.8 |
| abc transporter atp-binding protein | ISP_008464 | Q05067 | - | 9381001 - 9381804 | 28554.6 |
| zf-hc2 domain-containing protein | ISP_008465 | Not Available | - | 9381840 - 9382628 | 28095.9 |
| rna polymerase sigma factor | ISP_008466 | Q7U1Z6 | - | 9382625 - 9383182 | 20147.2 |
| mazg family protein | ISP_008467 | P33653 | - | 9383237 - 9384169 | 32928.1 |
| hypothetical protein | ISP_008468 | Not Available | - | 9384166 - 9385191 | 35811.6 |
| hypothetical protein | ISP_008469 | Not Available | + | 9385277 - 9385684 | 14825.7 |
| duf397 domain-containing protein | ISP_008470 | Not Available | - | 9385668 - 9385754 | 3038.61 |
| helix-turn-helix domain-containing protein | ISP_008471 | Not Available | - | 9385751 - 9386593 | 31462.1 |
| transcription-repair coupling factor | ISP_008472 | P64327 | - | 9386691 - 9390245 | 128267.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.