Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | ISP_008453 | Not Available | - | 9371283 - 9371729 | 16134.5 |
| tetratricopeptide repeat protein | ISP_008454 | Not Available | + | 9371802 - 9372206 | 15139.2 |
| murein transglycosylase | ISP_008455 | Not Available | - | 9372427 - 9373173 | 26135.6 |
| ftr1 family protein | ISP_008456 | Q8FJ36 | + | 9373609 - 9374454 | 29731.8 |
| efem/efeo family lipoprotein | ISP_008457 | Q8XAS6 | + | 9374451 - 9375596 | 40228.1 |
| iron uptake transporter deferrochelatase/peroxidase subunit | ISP_008458 | P39597 | + | 9375593 - 9376867 | 45032.0 |
| whg domain-containing protein | ISP_008459 | O53789 | + | 9376930 - 9377499 | 20271.1 |
| gdsl-type esterase/lipase family protein | ISP_008460 | Not Available | + | 9377496 - 9378629 | 39891.6 |
| ppox class f420-dependent oxidoreductase | ISP_008461 | L8EYU3 | + | 9378663 - 9379073 | 15531.3 |
| hypothetical protein | ISP_008462 | Not Available | - | 9379095 - 9379658 | 19267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.