Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | ISP_000822 | Not Available | + | 855734 - 856282 | 19704.5 |
| hypothetical protein | ISP_000823 | P9WKZ8 | + | 856437 - 857132 | 23386.3 |
| dna polymerase y family protein | ISP_000824 | A1U339 | + | 857596 - 859158 | 55258.1 |
| hypothetical protein | ISP_000825 | Not Available | + | 859161 - 859691 | 19749.6 |
| error-prone dna polymerase | ISP_000826 | Q5Z1D1 | + | 859692 - 863003 | 121446.0 |
| class i sam-dependent methyltransferase | ISP_000827 | Q8DGE4 | - | 862975 - 863724 | 27813.1 |
| pentapeptide repeat-containing protein | ISP_000828 | Not Available | + | 863853 - 864440 | 20986.8 |
| glycohydrolase toxin tnt-related protein | ISP_000829 | Q7S936 | - | 864487 - 867507 | 109550.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | ISP_000830 | A4FP42 | + | 867731 - 868585 | 29517.8 |
| duf3017 domain-containing protein | ISP_000831 | Not Available | + | 868585 - 868908 | 11296.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.