Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | ISP_008253 | Not Available | - | 9146865 - 9147152 | 10653.6 |
| adenosylhomocysteinase | ISP_008254 | A4ZHR8 | - | 9147263 - 9148735 | 53940.5 |
| hypothetical protein | ISP_008255 | Not Available | + | 9148830 - 9151100 | 78838.3 |
| lpxtg cell wall anchor domain-containing protein | ISP_008256 | Not Available | - | 9151151 - 9151837 | 23508.7 |
| amino acid permease | ISP_008257 | O07576 | - | 9152107 - 9153633 | 53562.1 |
| cation diffusion facilitator family transporter | ISP_008258 | Q5IRJ6 | - | 9153731 - 9154648 | 32098.3 |
| nb-arc domain-containing protein | ISP_008259 | Q9S0Y6 | + | 9154802 - 9157729 | 104207.0 |
| mannose-6-phosphate isomerase, class i | ISP_008260 | P00946 | - | 9158441 - 9159670 | 44189.9 |
| hypothetical protein | ISP_008261 | Not Available | - | 9159725 - 9160822 | 37644.1 |
| trm112 family protein | ISP_008262 | A9AGK3 | - | 9160806 - 9161027 | 7528.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.