Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | ISP_008203 | Q9KVK7 | + | 9100442 - 9101047 | 21192.6 |
| abc transporter substrate-binding protein | ISP_008204 | O32243 | - | 9101044 - 9101916 | 30704.7 |
| abc transporter permease subunit | ISP_008205 | O34878 | - | 9101913 - 9102596 | 23526.4 |
| abc transporter permease subunit | ISP_008206 | Q8ZPK3 | - | 9102593 - 9103231 | 22126.9 |
| atp-binding cassette domain-containing protein | ISP_008207 | Q45460 | - | 9103327 - 9104412 | 38559.4 |
| bis-aminopropyl spermidine synthase family protein | ISP_008208 | Q58088 | + | 9104506 - 9105912 | 50491.5 |
| nadp-dependent malic enzyme | ISP_008209 | P16468 | - | 9105965 - 9107146 | 40356.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ISP_008210 | A0QSK5 | + | 9107507 - 9108112 | 22353.4 |
| srpbcc family protein | ISP_008211 | Not Available | + | 9108172 - 9108648 | 16924.7 |
| marr family transcriptional regulator | ISP_008212 | P96625 | + | 9108645 - 9109079 | 15792.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.