Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is30 family transposase | ISP_008153 | Not Available | - | 9048347 - 9048709 | 13219.4 |
| is3 family transposase | ISP_008154 | P16940 | - | 9048926 - 9049756 | 30262.8 |
| is3 family transposase | ISP_008155 | P39213 | - | 9049843 - 9050166 | 11988.4 |
| hypothetical protein | ISP_008156 | Not Available | - | 9050516 - 9050743 | 8190.83 |
| helix-turn-helix domain-containing protein | ISP_008157 | Not Available | + | 9050979 - 9051722 | 27804.2 |
| nudix domain-containing protein | ISP_008158 | P46351 | + | 9051731 - 9052201 | 17362.2 |
| mae_28990/mae_18760 family hepn-like nuclease | ISP_008159 | Not Available | - | 9052207 - 9052950 | 27144.1 |
| duf262 domain-containing protein | ISP_008160 | Not Available | - | 9052952 - 9054076 | 42582.7 |
| alpha/beta hydrolase | ISP_008161 | P45370 | - | 9054782 - 9055837 | 38275.4 |
| sdr family oxidoreductase | ISP_008162 | Q49WS9 | - | 9055947 - 9056792 | 29587.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.