Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ISP_008113 | O32859 | + | 9001300 - 9002523 | 41509.4 |
| hypothetical protein | ISP_008114 | Not Available | - | 9002551 - 9002808 | 9336.12 |
| amidase | ISP_008115 | K9NBS6 | - | 9002867 - 9004249 | 48294.1 |
| d-2-hydroxyacid dehydrogenase | ISP_008116 | Q2VEQ7 | - | 9004246 - 9005244 | 35828.8 |
| arylmalonate decarboxylase | ISP_008117 | Q05115 | + | 9005346 - 9006086 | 26864.3 |
| arylmalonate decarboxylase | ISP_008118 | O24766 | + | 9006147 - 9006890 | 25925.8 |
| gntr family transcriptional regulator | ISP_008119 | P46833 | + | 9006892 - 9007611 | 26017.2 |
| duf4262 domain-containing protein | ISP_008120 | Not Available | - | 9007892 - 9008356 | 16401.6 |
| tartrate dehydrogenase | ISP_008121 | P76251 | - | 9008418 - 9009476 | 37715.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | ISP_008122 | Q8GAI8 | - | 9009473 - 9010936 | 51580.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.