Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase b/oxoprolinase family protein | ISP_008103 | Q58373 | - | 8990540 - 8992240 | 59597.7 |
| hydantoinase/oxoprolinase family protein | ISP_008104 | Q58374 | - | 8992264 - 8994285 | 71121.1 |
| thiamine pyrophosphate-binding protein | ISP_008105 | Q9HUI8 | - | 8994282 - 8995877 | 56682.9 |
| fad-binding oxidoreductase | ISP_008106 | Q4R510 | - | 8995949 - 8996515 | 20709.6 |
| wax ester/triacylglycerol synthase family o-acyltransferase | ISP_008107 | P9WKC6 | + | 8996787 - 8998151 | 50157.6 |
| pyrroloquinoline quinone precursor peptide pqqa | ISP_008108 | Not Available | + | 8998269 - 8998355 | 3297.82 |
| pyrroloquinoline-quinone synthase pqqc | ISP_008109 | A5FUM6 | + | 8998360 - 8999049 | 26103.2 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | ISP_008110 | B7VAB7 | + | 8999046 - 8999312 | 9657.76 |
| pyrroloquinoline quinone biosynthesis protein pqqe | ISP_008111 | P59749 | + | 8999303 - 9000367 | 38345.1 |
| pyrroloquinoline quinone biosynthesis protein pqqb | ISP_008112 | C1DEW8 | + | 9000364 - 9001191 | 28610.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.