Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ricin-type beta-trefoil lectin domain protein | ISP_008073 | O54161 | + | 8960450 - 8961907 | 50828.6 |
| ricin-type beta-trefoil lectin domain protein | ISP_008074 | P26514 | + | 8962003 - 8963841 | 63410.3 |
| right-handed parallel beta-helix repeat-containing protein | ISP_008075 | P0DW93 | + | 8963907 - 8965787 | 63616.2 |
| hypothetical protein | ISP_008076 | Not Available | + | 8965897 - 8966682 | 29068.4 |
| hypothetical protein | ISP_008077 | Not Available | + | 8966812 - 8966985 | 5729.96 |
| cellulose binding domain-containing protein | ISP_008078 | P29719 | + | 8967210 - 8969075 | 65363.5 |
| merr family transcriptional regulator | ISP_008079 | P40183 | - | 8969242 - 8969574 | 12181.2 |
| hypothetical protein | ISP_008080 | Not Available | + | 8970311 - 8970571 | 9364.08 |
| atp-binding protein | ISP_008081 | Not Available | - | 8970671 - 8971123 | 15863.8 |
| right-handed parallel beta-helix repeat-containing protein | ISP_008082 | E3E7F9 | + | 8971704 - 8972873 | 40605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.