Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | ISP_008063 | Q9S0Y6 | + | 8939189 - 8942272 | 112137.0 |
| cytochrome p450 | ISP_008064 | Q82IY3 | + | 8942938 - 8944263 | 48895.0 |
| hypothetical protein | ISP_008065 | A0A384JQC9 | + | 8944260 - 8945417 | 44146.1 |
| glycoside hydrolase family 28 protein | ISP_008066 | A7PZL3 | - | 8945545 - 8947089 | 54952.9 |
| pqq-dependent sugar dehydrogenase | ISP_008067 | P20533 | - | 8947210 - 8949294 | 72499.0 |
| ricin-type beta-trefoil lectin domain protein | ISP_008068 | Q9FXT4 | - | 8949497 - 8951077 | 55128.0 |
| ricin-type beta-trefoil lectin domain protein | ISP_008069 | O54161 | + | 8952312 - 8953763 | 52006.3 |
| cellulose binding domain-containing protein | ISP_008070 | P29719 | + | 8953869 - 8956082 | 77971.4 |
| rok family transcriptional regulator | ISP_008071 | D2PPN2 | + | 8956181 - 8957389 | 40568.7 |
| duf4982 domain-containing protein | ISP_008072 | T2KN75 | + | 8957806 - 8960412 | 94141.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.