Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | ISP_008033 | A4FN40 | - | 8910770 - 8911000 | 8501.05 |
| transcription termination factor rho | ISP_008034 | P66029 | - | 8911183 - 8913186 | 72245.5 |
| homoserine kinase | ISP_008035 | Q5Z0Z5 | - | 8913597 - 8914481 | 29669.4 |
| threonine synthase | ISP_008036 | A0R220 | - | 8914478 - 8915539 | 36549.7 |
| homoserine dehydrogenase | ISP_008037 | P63630 | - | 8915536 - 8916861 | 45492.0 |
| diaminopimelate decarboxylase | ISP_008038 | Q9X5M1 | - | 8916868 - 8918298 | 51150.6 |
| arginine--trna ligase | ISP_008039 | A4FN47 | - | 8918302 - 8919963 | 59547.4 |
| duf3105 domain-containing protein | ISP_008040 | Not Available | + | 8920160 - 8920978 | 28503.7 |
| duf305 domain-containing protein | ISP_008041 | Not Available | + | 8920975 - 8921688 | 25629.9 |
| hypothetical protein | ISP_008042 | Not Available | - | 8921692 - 8922030 | 11479.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.