Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | ISP_007983 | P96582 | - | 8866035 - 8866499 | 17080.4 |
| llm class flavin-dependent oxidoreductase | ISP_007984 | P9WKP0 | + | 8866593 - 8867432 | 30470.6 |
| nucleoside deaminase | ISP_007985 | O59834 | + | 8867429 - 8867854 | 15544.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | ISP_007986 | O27825 | + | 8867851 - 8868261 | 14506.1 |
| 3-hydroxybutyryl-coa dehydrogenase | ISP_007987 | P9WNP6 | - | 8868262 - 8870028 | 62260.5 |
| dihydroxyacetone kinase phosphoryl donor subunit dham | ISP_007988 | P37349 | - | 8870147 - 8870818 | 22449.3 |
| dihydroxyacetone kinase subunit dhal | ISP_007989 | P76014 | - | 8870815 - 8871444 | 20465.3 |
| dihydroxyacetone kinase subunit dhak | ISP_007990 | P76015 | - | 8871444 - 8872445 | 34566.4 |
| duf3558 domain-containing protein | ISP_007991 | Not Available | - | 8872521 - 8873513 | 34208.5 |
| hypothetical protein | ISP_007992 | Not Available | - | 8873561 - 8873845 | 9911.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.