Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | ISP_001863 | O69730 | + | 1961267 - 1961980 | 26168.4 |
| hamp domain-containing histidine kinase | ISP_001864 | O69729 | + | 1961977 - 1963398 | 50214.9 |
| pyridoxamine 5'-phosphate oxidase family protein | ISP_001865 | Not Available | - | 1963370 - 1964026 | 23193.6 |
| plp-dependent aminotransferase family protein | ISP_001866 | Q8NS92 | + | 1964107 - 1965471 | 47348.0 |
| d-alanine--d-alanine ligase | ISP_001867 | C1B2N8 | + | 1966032 - 1967126 | 38645.1 |
| duf3515 domain-containing protein | ISP_001868 | Not Available | - | 1967123 - 1967659 | 18073.8 |
| lrp/asnc ligand binding domain-containing protein | ISP_001869 | Q8U445 | - | 1967727 - 1967960 | 8014.67 |
| thiamine-phosphate kinase | ISP_001870 | P9WG70 | + | 1968098 - 1969054 | 32468.5 |
| gnat family n-acetyltransferase | ISP_001871 | P26945 | + | 1969071 - 1969550 | 17587.8 |
| glycoside hydrolase family 27 protein | ISP_001872 | P14749 | - | 1969537 - 1970760 | 43349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.