Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_001833 | B5M9L6 | + | 1924883 - 1926340 | 53237.7 |
| hypothetical protein | ISP_001834 | Not Available | + | 1926337 - 1927410 | 38822.8 |
| tetr/acrr family transcriptional regulator | ISP_001835 | A0R5K4 | + | 1927438 - 1928037 | 21388.7 |
| lsr2 family protein | ISP_001836 | P65649 | - | 1928212 - 1928625 | 14876.4 |
| hypothetical protein | ISP_001837 | Not Available | - | 1928874 - 1929059 | 6455.14 |
| hu family dna-binding protein | ISP_001838 | P0A3H7 | - | 1929690 - 1930367 | 23012.8 |
| atp-binding protein | ISP_001839 | Not Available | + | 1931010 - 1932761 | 62319.8 |
| exonuclease sbccd subunit d | ISP_001840 | P23479 | + | 1932793 - 1933953 | 41473.1 |
| smc family atpase | ISP_001841 | Q9RT44 | + | 1933955 - 1937419 | 120655.0 |
| hypothetical protein | ISP_001842 | Not Available | + | 1937416 - 1938393 | 35034.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.