Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | ISP_001683 | A0R4Z6 | - | 1767857 - 1768450 | 21841.4 |
| phenylacetate--coa ligase | ISP_001684 | Q9L9C1 | - | 1768447 - 1769724 | 47031.0 |
| hydroxyphenylacetyl-coa thioesterase paai | ISP_001685 | P76084 | - | 1769727 - 1770137 | 14212.8 |
| phenylacetic acid degradation bifunctional protein paaz | ISP_001686 | P77455 | + | 1770304 - 1772331 | 70986.3 |
| 1,2-phenylacetyl-coa epoxidase subunit a | ISP_001687 | P76077 | + | 1772328 - 1773260 | 35367.1 |
| 1,2-phenylacetyl-coa epoxidase subunit b | ISP_001688 | P76078 | + | 1773329 - 1773613 | 10832.7 |
| phenylacetate-coa oxygenase subunit paac | ISP_001689 | P76079 | + | 1773610 - 1774467 | 31260.7 |
| phenylacetate-coa oxygenase subunit paaj | ISP_001690 | P76080 | + | 1774461 - 1774949 | 17108.5 |
| is30 family transposase | ISP_001691 | P76081 | + | 1774950 - 1776002 | 37632.7 |
| hypothetical protein | ISP_001692 | Not Available | - | 1775958 - 1776320 | 12562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.