Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 28 protein | ISP_001653 | P35338 | + | 1732525 - 1734006 | 51171.5 |
| glycoside hydrolase family 88 protein | ISP_001654 | O34559 | - | 1734183 - 1735370 | 43943.9 |
| alpha-l-fucosidase | ISP_001655 | Q0TR53 | + | 1735723 - 1737495 | 64678.2 |
| hypothetical protein | ISP_001656 | D8QTR2 | - | 1737536 - 1738765 | 44933.8 |
| rok family protein | ISP_001657 | D2PPN2 | + | 1738827 - 1739981 | 39313.4 |
| s53 family peptidase | ISP_001658 | P42790 | + | 1740285 - 1742216 | 67454.4 |
| sensor histidine kinase | ISP_001659 | Q7WZY5 | - | 1742307 - 1743842 | 53395.1 |
| cytosine permease | ISP_001660 | P94369 | + | 1743977 - 1745350 | 47123.1 |
| sdr family oxidoreductase | ISP_001661 | Q9KWN1 | + | 1745395 - 1746066 | 23051.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ISP_001662 | Q9WZ44 | + | 1746063 - 1747070 | 35529.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.