Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | ISP_001633 | P9WF04 | - | 1708099 - 1709178 | 39119.1 |
| fcd domain-containing protein | ISP_001634 | P31475 | - | 1709248 - 1709916 | 23851.7 |
| abc transporter permease | ISP_001635 | P0AGI3 | - | 1709919 - 1710944 | 34744.5 |
| sugar abc transporter atp-binding protein | ISP_001636 | Q987E7 | - | 1710941 - 1712479 | 55168.8 |
| substrate-binding domain-containing protein | ISP_001637 | Q1JUP8 | - | 1712543 - 1713517 | 33172.1 |
| capa family protein | ISP_001638 | P19579 | + | 1713884 - 1715026 | 39499.5 |
| polyprenyl synthetase family protein | ISP_001639 | P0A5H9 | - | 1715189 - 1716208 | 35019.6 |
| cyclic nucleotide-binding domain-containing protein | ISP_001640 | Q55032 | - | 1716208 - 1717599 | 51232.0 |
| crp/fnr family transcriptional regulator | ISP_001641 | Q55032 | - | 1717596 - 1718237 | 23594.2 |
| is30 family transposase | ISP_001642 | Not Available | - | 1718400 - 1718786 | 13964.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.