Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | ISP_001572 | P25941 | + | 1641794 - 1644481 | 98492.6 |
| marr family transcriptional regulator | ISP_001574 | Not Available | + | 1645009 - 1645431 | 15925.8 |
| carotenoid oxygenase family protein | ISP_001575 | O65572 | + | 1645471 - 1647033 | 58172.3 |
| is30 family transposase | ISP_001576 | Not Available | - | 1647028 - 1647380 | 12858.3 |
| marr family winged helix-turn-helix transcriptional regulator | ISP_001577 | P96625 | - | 1647440 - 1647976 | 19960.8 |
| doxx family protein | ISP_001578 | Not Available | + | 1648082 - 1648462 | 12981.6 |
| nadp-dependent oxidoreductase | ISP_001579 | Q0VC50 | + | 1648515 - 1649456 | 30472.7 |
| duf6069 family protein | ISP_001580 | Not Available | + | 1649552 - 1649980 | 14538.2 |
| dioxygenase | ISP_001581 | Q70FG7 | + | 1650014 - 1650892 | 31841.9 |
| hydroxymethylglutaryl-coa lyase | ISP_001582 | Q29448 | - | 1651029 - 1651964 | 32679.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.