Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | ISP_001522 | A0R5K4 | + | 1589612 - 1590178 | 21041.2 |
| glycoside hydrolase family 15 protein | ISP_001523 | P71741 | - | 1590225 - 1592027 | 65682.3 |
| glucose 1-dehydrogenase | ISP_001524 | Q0W5A6 | - | 1592033 - 1593085 | 37359.8 |
| ricin domain-containing protein | ISP_001525 | Not Available | - | 1593249 - 1594703 | 51294.5 |
| lytic polysaccharide monooxygenase | ISP_001526 | Q02I11 | - | 1594880 - 1595542 | 24177.2 |
| hypothetical protein | ISP_001527 | Not Available | + | 1595814 - 1596434 | 21481.5 |
| tigr03619 family f420-dependent llm class oxidoreductase | ISP_001528 | P9WKN4 | - | 1596517 - 1597410 | 31831.8 |
| duf72 domain-containing protein | ISP_001529 | Q8XCI6 | + | 1597670 - 1598494 | 30867.6 |
| fkbm family methyltransferase | ISP_001530 | Q8KCD5 | - | 1598509 - 1599648 | 41398.9 |
| ig-like domain-containing protein | ISP_001531 | O53223 | + | 1599787 - 1601004 | 42110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.