Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vtt domain-containing protein | ISP_001442 | Not Available | - | 1503766 - 1504347 | 20293.4 |
| mbl fold metallo-hydrolase | ISP_001443 | Q1J245 | - | 1504344 - 1505126 | 27432.1 |
| germacradienol/geosmin synthase | ISP_001444 | Q9X839 | - | 1505187 - 1507406 | 82663.1 |
| n-acetyltransferase | ISP_001445 | P39274 | + | 1507573 - 1507869 | 10973.8 |
| s1 family peptidase | ISP_001446 | P52321 | + | 1508022 - 1509038 | 34077.7 |
| methyltransferase domain-containing protein | ISP_001447 | Q0VP64 | - | 1509095 - 1509718 | 23303.3 |
| discoidin domain-containing protein | ISP_001448 | Q557A2 | - | 1509796 - 1511373 | 53367.6 |
| sdr family oxidoreductase | ISP_001449 | P0AEK2 | + | 1511544 - 1512272 | 24809.2 |
| cytochrome p450 | ISP_001450 | P18327 | + | 1512370 - 1513569 | 43716.1 |
| aspartate--trna(asn) ligase | ISP_001451 | Q5SIC2 | + | 1513895 - 1515109 | 44450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.