Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | ISP_001412 | P76241 | - | 1468274 - 1469044 | 27931.4 |
| dinb family protein | ISP_001413 | P14706 | - | 1469082 - 1469573 | 18019.3 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | ISP_001414 | Q23892 | + | 1469728 - 1471560 | 65292.0 |
| ricin domain-containing protein | ISP_001415 | Not Available | + | 1471589 - 1472860 | 46016.0 |
| dna topoisomerase 4 subunit a | ISP_001416 | P0C0R0 | - | 1472903 - 1475389 | 89764.5 |
| type iia dna topoisomerase subunit b | ISP_001417 | A0QNE0 | - | 1475419 - 1477470 | 74570.2 |
| hypothetical protein | ISP_001418 | Not Available | - | 1477605 - 1479107 | 52225.6 |
| llm class flavin-dependent oxidoreductase | ISP_001419 | Q6F9F6 | + | 1479215 - 1480324 | 40901.4 |
| fmn reductase | ISP_001420 | O31038 | + | 1480321 - 1480908 | 20072.0 |
| dihydrofolate reductase family protein | ISP_001421 | Not Available | - | 1480971 - 1481579 | 21575.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.