Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | ISP_001302 | Q87QW9 | + | 1357051 - 1358133 | 38414.4 |
| sugar abc transporter substrate-binding protein | ISP_001303 | P94528 | + | 1358213 - 1359520 | 46650.9 |
| sugar abc transporter permease | ISP_001304 | Q7CRU3 | + | 1359531 - 1360481 | 33836.2 |
| carbohydrate abc transporter permease | ISP_001305 | Q9KEE9 | + | 1360478 - 1361320 | 30557.0 |
| hydroxyacid dehydrogenase | ISP_001306 | O33116 | + | 1361317 - 1362321 | 35566.9 |
| duf2264 domain-containing protein | ISP_001307 | Not Available | + | 1362318 - 1364147 | 65196.3 |
| family 43 glycosylhydrolase | ISP_001308 | Not Available | + | 1364313 - 1365806 | 51914.7 |
| right-handed parallel beta-helix repeat-containing protein | ISP_001309 | P0DW93 | + | 1365863 - 1367515 | 56999.0 |
| carbon-nitrogen hydrolase family protein | ISP_001310 | P9WJ00 | - | 1367566 - 1368558 | 36969.8 |
| hypothetical protein | ISP_001311 | Not Available | - | 1368788 - 1369273 | 18276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.