Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase | ISP_001262 | E5F146 | - | 1311645 - 1312406 | 27840.8 |
| abc transporter atp-binding protein | ISP_001263 | O07016 | + | 1312569 - 1313420 | 30959.8 |
| abc transporter permease | ISP_001264 | P0AFQ0 | + | 1313413 - 1314246 | 29964.4 |
| sensor histidine kinase | ISP_001265 | O32198 | + | 1314255 - 1315433 | 41365.4 |
| response regulator transcription factor | ISP_001266 | P0C0Z1 | + | 1315430 - 1316071 | 22335.2 |
| ndp-hexose 2,3-dehydratase family protein | ISP_001267 | Q9ALN6 | + | 1316170 - 1317591 | 52282.6 |
| hydroxyneurosporene methyltransferase | ISP_001268 | B3GSH5 | + | 1317612 - 1318640 | 36379.3 |
| tryptophan 2,3-dioxygenase | ISP_001269 | Q5LKH2 | + | 1318640 - 1319692 | 39116.2 |
| hypothetical protein | ISP_001270 | Not Available | - | 1319792 - 1320007 | 7463.46 |
| duf1205 domain-containing protein | ISP_001271 | Q9L555 | + | 1320241 - 1321410 | 41759.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.