Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tcmi family type ii polyketide cyclase | ISP_001232 | Q02588 | + | 1279950 - 1280273 | 11890.1 |
| cupin domain-containing protein | ISP_001233 | P23157 | + | 1280273 - 1280692 | 14955.6 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | ISP_001234 | P16538 | + | 1280689 - 1281948 | 43480.2 |
| ketosynthase chain-length factor | ISP_001235 | Q02062 | + | 1281945 - 1283183 | 42382.1 |
| acyl carrier protein | ISP_001236 | Q02054 | + | 1283208 - 1283453 | 8835.6 |
| srpbcc family protein | ISP_001237 | P23154 | + | 1283455 - 1283922 | 17976.1 |
| duf1772 domain-containing protein | ISP_001238 | Not Available | + | 1283927 - 1284376 | 15887.8 |
| sdr family oxidoreductase | ISP_001239 | O67610 | + | 1284396 - 1285130 | 25663.1 |
| antibiotic biosynthesis monooxygenase | ISP_001240 | Not Available | + | 1285142 - 1285474 | 12546.8 |
| antibiotic biosynthesis monooxygenase | ISP_001241 | Q05361 | + | 1285471 - 1285776 | 11012.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.