Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ISP_001212 | P76108 | + | 1256396 - 1257598 | 43003.5 |
| abc transporter permease | ISP_001213 | P77156 | + | 1257674 - 1258504 | 29666.7 |
| abc transporter permease | ISP_001214 | P0AFR9 | + | 1258528 - 1259310 | 27794.5 |
| prolyl aminopeptidase | ISP_001215 | Q9PD69 | - | 1259323 - 1260267 | 34492.9 |
| undecaprenyl-diphosphate phosphatase | ISP_001216 | P60939 | + | 1260746 - 1261672 | 32653.5 |
| cytochrome c oxidase assembly protein | ISP_001217 | P9WM62 | + | 1261674 - 1262522 | 30786.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ISP_001218 | A4FA49 | - | 1262531 - 1263400 | 30802.9 |
| bifunctional lysylphosphatidylglycerol synthetase/lysine--trna ligase lysx | ISP_001219 | Q5Z3P6 | + | 1263639 - 1266962 | 121814.0 |
| hypothetical protein | ISP_001220 | Not Available | + | 1267026 - 1267592 | 20027.1 |
| dinb family protein | ISP_001221 | P14706 | + | 1267666 - 1268256 | 21455.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.