Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnb domain-containing ribonuclease | ISP_001202 | P54084 | + | 1245382 - 1246788 | 50138.6 |
| helical backbone metal receptor | ISP_001203 | Q87SE7 | + | 1246785 - 1247561 | 28244.5 |
| aldehyde dehydrogenase family protein | ISP_001204 | Q53197 | - | 1247533 - 1248960 | 49401.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | ISP_001205 | P63505 | - | 1248957 - 1250312 | 46773.0 |
| pucr family transcriptional regulator | ISP_001206 | Q8GAH9 | + | 1250414 - 1251877 | 51605.1 |
| hypothetical protein | ISP_001207 | Not Available | + | 1251903 - 1252301 | 13465.1 |
| cache domain-containing protein | ISP_001208 | Not Available | - | 1252277 - 1253005 | 25838.7 |
| fcd domain-containing protein | ISP_001209 | Q9LBW6 | - | 1253040 - 1253774 | 26113.1 |
| gamma-aminobutyraldehyde dehydrogenase | ISP_001210 | Q6D6Y7 | + | 1253885 - 1255306 | 50521.1 |
| abc transporter atp-binding protein | ISP_001211 | P77795 | + | 1255315 - 1256385 | 38826.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.