Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c4-type zinc ribbon domain-containing protein | ISP_001182 | P9WLH2 | + | 1219238 - 1219975 | 27697.8 |
| bifunctional rnase h/acid phosphatase | ISP_001183 | P9WLH5 | + | 1220053 - 1221261 | 42672.8 |
| hypothetical protein | ISP_001184 | Not Available | + | 1221461 - 1223203 | 61594.4 |
| slc13 family permease | ISP_001185 | P96678 | - | 1223187 - 1224428 | 42762.6 |
| aaa family atpase | ISP_001186 | P11470 | - | 1224721 - 1227546 | 100606.0 |
| hypothetical protein | ISP_001187 | Not Available | - | 1227578 - 1227985 | 13562.5 |
| sigma-70 family rna polymerase sigma factor | ISP_001188 | H8EXN1 | - | 1227982 - 1228560 | 21550.7 |
| duf4142 domain-containing protein | ISP_001189 | Not Available | + | 1228809 - 1229477 | 23350.9 |
| ferredoxin | ISP_001190 | Q83WF4 | + | 1229486 - 1230298 | 28261.6 |
| nad(p)/fad-dependent oxidoreductase | ISP_001191 | A5W4E9 | + | 1230295 - 1231530 | 43900.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.