Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | ISP_001162 | P40981 | + | 1202831 - 1204030 | 41468.7 |
| extracellular solute-binding protein | ISP_001163 | Q9V297 | + | 1204055 - 1205413 | 48861.7 |
| sugar abc transporter permease | ISP_001164 | O31519 | + | 1205548 - 1206435 | 32237.6 |
| carbohydrate abc transporter permease | ISP_001165 | O31520 | + | 1206432 - 1207322 | 33190.3 |
| 6-phospho-beta-glucosidase | ISP_001166 | P46320 | + | 1207319 - 1208584 | 45779.3 |
| n-acetylglucosamine kinase | ISP_001167 | Q54PM7 | + | 1208581 - 1209549 | 32972.6 |
| srpbcc domain-containing protein | ISP_001168 | Not Available | - | 1209605 - 1210117 | 18745.2 |
| metalloregulator arsr/smtb family transcription factor | ISP_001169 | C0H3Q8 | - | 1210114 - 1210437 | 12628.3 |
| duf2510 domain-containing protein | ISP_001170 | Not Available | - | 1210562 - 1210828 | 9637.66 |
| gntp family permease | ISP_001171 | Q9ZIJ1 | - | 1210925 - 1212292 | 45944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.