Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit nirb | ISP_001132 | Q06458 | + | 1167278 - 1169800 | 88596.8 |
| nitrite reductase small subunit nird | ISP_001133 | Q06458 | + | 1169797 - 1170138 | 12001.2 |
| uroporphyrinogen-iii synthase | ISP_001134 | O34394 | + | 1170135 - 1171238 | 37805.9 |
| duf4097 domain-containing protein | ISP_001135 | Not Available | + | 1171331 - 1171993 | 22215.1 |
| winged helix dna-binding domain-containing protein | ISP_001136 | Not Available | - | 1172083 - 1173186 | 39444.6 |
| duf3224 domain-containing protein | ISP_001137 | Not Available | - | 1173196 - 1173591 | 13990.1 |
| yafy family transcriptional regulator | ISP_001138 | O34920 | + | 1173655 - 1174623 | 35956.0 |
| uroporphyrinogen-iii synthase | ISP_001139 | O34394 | + | 1174616 - 1175425 | 27757.3 |
| mgmt family protein | ISP_001140 | P0AFP2 | - | 1175517 - 1175837 | 11650.9 |
| atp-dependent helicase | ISP_001141 | P0A5A4 | + | 1176001 - 1179174 | 113281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.