Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| discoidin domain-containing protein | ISP_001112 | Not Available | + | 1144783 - 1147245 | 86326.6 |
| pd-(d/e)xk nuclease family protein | ISP_001113 | Not Available | + | 1147519 - 1148370 | 31244.8 |
| hypothetical protein | ISP_001114 | Not Available | + | 1148383 - 1148976 | 19935.6 |
| hypothetical protein | ISP_001115 | Not Available | - | 1149111 - 1150424 | 45777.1 |
| dead/deah box helicase | ISP_001116 | Q8Y8N0 | - | 1150451 - 1152247 | 64582.0 |
| ferritin-like domain-containing protein | ISP_001117 | Not Available | + | 1152478 - 1153131 | 23162.6 |
| duf3107 domain-containing protein | ISP_001118 | Not Available | + | 1153251 - 1153481 | 8246.85 |
| hypothetical protein | ISP_001119 | Not Available | + | 1153606 - 1153764 | 5764.93 |
| duf4873 domain-containing protein | ISP_001120 | P9WKN6 | - | 1153833 - 1154150 | 11494.4 |
| tetr/acrr family transcriptional regulator | ISP_001121 | P9WMD8 | - | 1154147 - 1154917 | 28668.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.