Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | ISP_001082 | Q5SMG8 | - | 1118151 - 1119428 | 46199.6 |
| aminoglycoside phosphotransferase family protein | ISP_001083 | Q00923 | - | 1119439 - 1120413 | 35289.2 |
| slipin family protein | ISP_001084 | O28852 | + | 1120507 - 1121388 | 31900.5 |
| duf4190 domain-containing protein | ISP_001085 | Not Available | - | 1121385 - 1122146 | 25525.5 |
| duf4190 domain-containing protein | ISP_001086 | Not Available | - | 1122187 - 1122579 | 13246.2 |
| acyl-coa dehydrogenase family protein | ISP_001087 | P45857 | + | 1122721 - 1123917 | 43184.0 |
| magnesium transporter | ISP_001088 | Not Available | + | 1124031 - 1124558 | 18484.7 |
| abc transporter substrate-binding protein | ISP_001089 | P9WGU8 | + | 1124803 - 1126125 | 47186.2 |
| sugar abc transporter permease | ISP_001090 | P9WG02 | + | 1126122 - 1127093 | 34835.0 |
| carbohydrate abc transporter permease | ISP_001091 | P9WG00 | + | 1127093 - 1127932 | 30298.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.