Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase family protein | ISP_001072 | Q029J4 | + | 1106168 - 1107679 | 52208.4 |
| lysr family transcriptional regulator | ISP_001073 | P37499 | - | 1107604 - 1108569 | 33581.5 |
| mfs transporter | ISP_001074 | P37498 | + | 1108632 - 1109864 | 40865.7 |
| o-methyltransferase | ISP_001075 | B2HS47 | - | 1111242 - 1111886 | 22287.8 |
| rna polymerase sigma factor sige | ISP_001076 | A0R2D4 | + | 1112098 - 1112688 | 22107.0 |
| hypothetical protein | ISP_001077 | A0R2D3 | + | 1112685 - 1113335 | 21597.7 |
| trypsin-like peptidase domain-containing protein | ISP_001078 | O06291 | + | 1114118 - 1115647 | 51271.8 |
| sec-independent protein translocase protein tatb | ISP_001079 | A4F8J0 | + | 1115725 - 1116147 | 15152.0 |
| mrp/nbp35 family atp-binding protein | ISP_001080 | P65442 | - | 1116502 - 1117647 | 39663.3 |
| duf1003 domain-containing protein | ISP_001081 | Not Available | - | 1117658 - 1118158 | 19062.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.