Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ISP_001042 | A0R2G5 | - | 1072428 - 1073411 | 33686.0 |
| hypothetical protein | ISP_001043 | Not Available | - | 1073440 - 1073871 | 14379.2 |
| succinyl-diaminopimelate desuccinylase | ISP_001044 | P9WHS8 | + | 1073895 - 1074965 | 37715.8 |
| duf3152 domain-containing protein | ISP_001045 | Not Available | + | 1075210 - 1076022 | 28253.2 |
| chitinase | ISP_001046 | E9F7R6 | - | 1076019 - 1077071 | 36793.1 |
| m28 family metallopeptidase | ISP_001047 | P81715 | - | 1077211 - 1078815 | 54664.2 |
| m4 family metallopeptidase | ISP_001048 | P83913 | - | 1078901 - 1081165 | 75977.5 |
| is30 family transposase | ISP_001049 | Not Available | - | 1082609 - 1082743 | 4852.59 |
| m4 family metallopeptidase | ISP_001050 | P83913 | - | 1082816 - 1084834 | 68266.8 |
| helix-turn-helix domain-containing protein | ISP_001051 | Not Available | - | 1085214 - 1086500 | 46594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.