Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | ISP_001032 | Not Available | - | 1063959 - 1064504 | 18998.3 |
| coenzyme f420-0:l-glutamate ligase | ISP_001033 | Q5YQS0 | - | 1064501 - 1065847 | 47727.9 |
| 2-phospho-l-lactate transferase | ISP_001034 | Q5YQR9 | - | 1065840 - 1066829 | 34393.1 |
| gnat family n-acetyltransferase | ISP_001035 | Q67UR2 | - | 1066826 - 1067578 | 26083.8 |
| hypothetical protein | ISP_001036 | Not Available | + | 1067637 - 1067819 | 6926.11 |
| ferredoxin family protein | ISP_001037 | P24496 | + | 1067944 - 1068264 | 11625.5 |
| succinyldiaminopimelate transaminase | ISP_001038 | O50434 | + | 1068261 - 1069352 | 39133.1 |
| tetr/acrr family transcriptional regulator | ISP_001039 | Q9KJC4 | - | 1069346 - 1069963 | 22395.1 |
| fad-dependent monooxygenase | ISP_001040 | B1MM05 | + | 1070045 - 1071451 | 49800.8 |
| chad domain-containing protein | ISP_001041 | Not Available | - | 1071467 - 1072399 | 34066.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.