Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368
Accession NumberCP100416.1
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1206 domain-containing protein | ISP_001012 | P39139 | + | 1044310 - 1045125 | 28061.4 |
| doxx family protein | ISP_001013 | P96694 | + | 1045238 - 1045678 | 15316.0 |
| tigr03089 family protein | ISP_001014 | P96873 | - | 1045729 - 1046433 | 24623.9 |
| nad(p)h-binding protein | ISP_001015 | B1VN94 | + | 1046543 - 1047379 | 29074.3 |
| lcp family protein | ISP_001016 | Q8NSD6 | - | 1047372 - 1048751 | 47936.6 |
| lcp family protein | ISP_001017 | Q8NSD6 | - | 1048789 - 1050315 | 53402.8 |
| dtdp-glucose 4,6-dehydratase | ISP_001018 | Q9RR28 | + | 1050453 - 1051442 | 35822.3 |
| dtdp-4-dehydrorhamnose reductase | ISP_001019 | Q9RR27 | + | 1051448 - 1052353 | 31052.3 |
| glycosyltransferase family 4 protein | ISP_001020 | D5UJ42 | - | 1052339 - 1053424 | 38635.4 |
| glycosyltransferase | ISP_001021 | Q50864 | - | 1053417 - 1055927 | 91112.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.