Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis sp. Q1
Accession NumberCP080519.1
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa transferase | K1T34_47065 | Q7CXU0 | + | 9755439 - 9756617 | 41546.3 |
| citryl-coa lyase | K1T34_47070 | Q9RWB2 | + | 9756614 - 9757414 | 28090.8 |
| catechol 1,2-dioxygenase | K1T34_47075 | Q471I0 | + | 9757447 - 9758310 | 31555.1 |
| duf397 domain-containing protein | K1T34_47080 | Not Available | - | 9758394 - 9758570 | 6380.44 |
| helix-turn-helix domain-containing protein | K1T34_47085 | Not Available | - | 9758574 - 9759422 | 31137.9 |
| hypothetical protein | K1T34_47090 | Not Available | + | 9759551 - 9759808 | 9977.65 |
| helix-turn-helix transcriptional regulator | K1T34_47095 | Not Available | + | 9759805 - 9760431 | 23218.6 |
| nadp-dependent succinic semialdehyde dehydrogenase | K1T34_47100 | Q7U2I0 | + | 9760672 - 9762048 | 49788.1 |
| sdr family oxidoreductase | K1T34_47105 | Q9KQH7 | - | 9762067 - 9762846 | 26235.3 |
| atp-grasp domain-containing protein | K1T34_47110 | P46392 | - | 9762891 - 9764699 | 62986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.