Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis acidiphila |
| Strain | 46058 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis acidiphila 46058
Accession NumberCP090063.1
Gene Summary
Adenine Count
1207653 bp
Thymine Count
1213109 bp
Guanine Count
2888643 bp
Cytosine Count
2874217 bp
Genome Length
8183622 bp
Protein-coding Genes
7972 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | LWP59_31525 | Q52154 | - | 6441659 - 6442456 | 28838.5 |
| 4-carboxymuconolactone decarboxylase | LWP59_31530 | P20370 | - | 6442462 - 6442854 | 14095.7 |
| 3-oxoadipate enol-lactonase | LWP59_31535 | P00632 | - | 6442851 - 6443624 | 27441.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | LWP59_31540 | Q9I6Q8 | - | 6443621 - 6444955 | 46520.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | LWP59_31545 | P20371 | - | 6444948 - 6445493 | 19697.9 |
| protocatechuate 3,4-dioxygenase subunit beta | LWP59_31550 | P15110 | - | 6445490 - 6446233 | 28104.0 |
| thiolase family protein | LWP59_31555 | P0C7L2 | - | 6446251 - 6447438 | 41006.7 |
| coa-transferase subunit beta | LWP59_31560 | Q8VPF2 | - | 6447438 - 6448166 | 25743.8 |
| coa transferase subunit a | LWP59_31565 | Q8VPF3 | - | 6448205 - 6449023 | 29765.2 |
| d-glycerate dehydrogenase | LWP59_31570 | O58320 | + | 6449108 - 6450025 | 32379.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.