Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NQ492_07945 | P57061 | + | 1832043 - 1833251 | 43264.7 |
| duf4296 domain-containing protein | NQ492_07950 | Not Available | + | 1833248 - 1834078 | 31791.9 |
| cytosine deaminase | NQ492_07955 | Not Available | + | 1834035 - 1834388 | 12599.3 |
| site-specific tyrosine recombinase xerd | NQ492_07960 | Q71Y59 | - | 1834519 - 1835415 | 34706.9 |
| 50s ribosomal protein l11 methyltransferase | NQ492_07965 | P60093 | + | 1835484 - 1836314 | 29517.2 |
| dna repair protein reco | NQ492_07970 | Q8A275 | + | 1836448 - 1837173 | 27467.3 |
| hypothetical protein | NQ492_07975 | Not Available | + | 1837207 - 1837581 | 13862.7 |
| opro/oprp family phosphate-selective porin | NQ492_07980 | Not Available | + | 1837701 - 1838768 | 39661.4 |
| putative sulfate exporter family transporter | NQ492_07985 | Q7ULI3 | + | 1838779 - 1840056 | 45988.0 |
| ygiq family radical sam protein | NQ492_07990 | Q8AB57 | - | 1840151 - 1841959 | 67781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.