Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 1148846 - 1148919 | Not Available |
| Trna-ile | Not Available | Not Available | + | 1148936 - 1149009 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 1149113 - 1150636 | Not Available |
| s8 family serine peptidase | NQ492_04960 | Q45670 | - | 1151189 - 1153273 | 73802.8 |
| lipoprotein signal peptidase | NQ492_04965 | B2RI39 | + | 1153408 - 1154022 | 23195.8 |
| Trna-leu | Not Available | Not Available | + | 1154092 - 1154173 | Not Available |
| transposase | NQ492_04975 | Not Available | + | 1154713 - 1155003 | 10701.0 |
| transposase | NQ492_04980 | Q45968 | + | 1155118 - 1155549 | 16227.0 |
| 4-alpha-glucanotransferase | NQ492_04985 | Q69Q02 | + | 1156040 - 1158643 | 100586.0 |
| lyttr family dna-binding domain-containing protein | NQ492_04990 | Q8D4U6 | - | 1159018 - 1159770 | 28677.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.