Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes shahii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes shahii
Accession NumberCP102253.1
Gene Summary
Adenine Count
812106 bp
Thymine Count
813877 bp
Guanine Count
1089895 bp
Cytosine Count
1093740 bp
Genome Length
3809618 bp
Protein-coding Genes
3148 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | NQ492_04895 | P31519 | + | 1137748 - 1138290 | 19983.0 |
| arac family transcriptional regulator | NQ492_04900 | P32677 | + | 1138562 - 1139383 | 31283.7 |
| bama/tama family outer membrane protein | NQ492_04905 | Q9K1H0 | - | 1139394 - 1141769 | 90583.5 |
| nitroreductase family protein | NQ492_04910 | O30013 | - | 1141774 - 1142520 | 28260.8 |
| diaminopimelate epimerase | NQ492_04915 | A6GYX5 | + | 1142656 - 1143462 | 29371.5 |
| hypothetical protein | NQ492_04920 | Not Available | + | 1143483 - 1143674 | 7559.75 |
| alpha/beta hydrolase | NQ492_04925 | A0KF11 | + | 1143686 - 1144486 | 29505.7 |
| class i sam-dependent methyltransferase | NQ492_04930 | Q58523 | + | 1144682 - 1145458 | 30825.1 |
| 5s ribosomal rna | Not Available | Not Available | + | 1145658 - 1145771 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1145884 - 1148756 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.